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第1回
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Guidance and Experimental Plan
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Introduce course objectives and outline experiments linking nutrient metabolism, signaling, and viral infection.
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第2回
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Cell Lines and Culture Conditions
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Define cell lines and culture media, setting different nutrient conditions (e.g., glucose/AA levels).
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第3回
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Nutrient Conditions and Cell Growth
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Assess cell growth and viability under varied nutrient conditions.
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第4回
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Cellular Signaling 1
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Analyze effects of nutrient conditions on mTORC1 signaling by western blotting.
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第5回
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Cellular Signaling 2
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Examine regulation of mTORC1 using amino acid starvation and inhibitors.
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第6回
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Autophagy Induction 1
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Evaluate autophagy induction under starvation using markers like LC3 by western blot.
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第7回
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Autophagy Induction 2
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Visualize autophagic structures using fluorescent probes or tagged LC3.
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第8回
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Membrane Trafficking
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Monitor endocytic pathways under different nutrient states.
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第9回
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Nutrients and Trafficking
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Compare membrane trafficking dynamics under distinct nutrient conditions.
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第10回
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Interim Discussion
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Discuss interim results on nutrient signaling, autophagy, and trafficking.
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第11回
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Viral Infection Setup
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Design infection experiments considering virus type, MOI, and safety.
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第12回
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Nutrients and Infection 1
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Evaluate how nutrient conditions affect viral infection efficiency.
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第13回
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Nutrients and Infection 2
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Analyze signaling and autophagy changes in infected cells under different nutrient states.
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第14回
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Flow Cytometry 1
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Use flow cytometry to analyze infection, stress responses, or cell death profiles.
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第15回
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Flow Cytometry 2
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Compare cell populations across combined nutrient and infection conditions.
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第16回
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Immunofluorescence
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Visualize subcellular localization of signaling or autophagy‑related proteins.
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第17回
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Gene Expression 1
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Analyze expression changes of selected genes under different nutrient and infection conditions.
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第18回
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Gene Expression 2 / RNA‑seq Overview
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Learn how to interpret RNA‑seq/variant data as an extension of expression analysis.
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第19回
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Signaling Network Integration
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Integrate signaling and expression data into a network model.
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第20回
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Data Analysis 1
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Organize and visualize experimental data (graphs, figures, tables).
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第21回
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Data Analysis 2
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Analyze nutrient‑dependent and infection‑dependent changes.
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第22回
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Individual Theme 1
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Define a small project connecting this course to each student's research topic.
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第23回
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Individual Theme 2
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Plan experiments using selected techniques tailored to each theme.
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第24回
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Individual Experiments 1
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Perform individual experiments and optimize conditions.
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第25回
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Individual Experiments 2
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Continue experiments and collect sufficient data.
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第26回
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Interpretation 1
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Summarize data and draft preliminary interpretations.
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第27回
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Interpretation 2
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Discuss results in the context of literature on metabolism, signaling, and infection.
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第28回
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Presentation Preparation
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Prepare slides and abstracts for final presentations.
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第29回
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Final Presentation
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Present experimental results, including individual themes, followed by Q&A.
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第30回
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Wrap‑up and Perspectives
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Review the course and discuss applications of the techniques to future research.
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※AL(アクティブ・ラーニング)欄に関する注 ・授業全体で、AL(アクティブ・ラーニング)が占める時間の割合を、それぞれの項目ごとに示しています。 ・A〜Dのアルファベットは、以下の学修形態を指しています。 【A:グループワーク】、【B:ディスカッション・ディベート】、【C:フィールドワーク(実験・実習、演習を含む)】、【D:プレゼンテーション】
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